Transcript: lnc-HPRT1-7:2

Basic information

LNCipedia transcript ID: lnc-HPRT1-7:2 
LNCipedia gene ID: lnc-HPRT1-7
Location (hg38): chrX:134385980-134387082
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 215 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3970_chrX:133520009-133521112_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.9667 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HPRT1-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HPRT1-7:2
4.0 lnc-HPRT1-7:2
4.1 lnc-HPRT1-7:2
5.0 lnc-HPRT1-7:2
5.1 lnc-TEX13C-120:2
5.2 lnc-HPRT1-7:2