Transcript: lnc-HOOK1-7:3

Basic information

LNCipedia transcript ID: lnc-HOOK1-7:3 
LNCipedia gene ID: lnc-HOOK1-7
Location (hg38): chr1:59296986-59316306
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 471 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT003563
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.7938 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HOOK1-7:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HOOK1-7:3
4.0 lnc-HOOK1-7:3
4.1 lnc-HOOK1-7:3
5.0 lnc-HOOK1-7:3
5.1 lnc-USP1-30:1
5.2 lnc-HOOK1-7:3