Transcript: lnc-HNRNPU-3:1

Basic information

LNCipedia transcript ID: lnc-HNRNPU-3:1 
LNCipedia gene ID: lnc-HNRNPU-3
Location (hg38): chr1:245221135-245224285
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2434 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000509125
Alternative gene names: ENSG00000250146


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.174 non-coding 
CPAT coding probability 1.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPU-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HNRNPU-2:1
3.1 lnc-HNRNPU-3:1
4.0 lnc-HNRNPU-3:1
4.1 lnc-HNRNPU-3:1
5.0 lnc-HNRNPU-3:1
5.1 lnc-LYPD8-40:1
5.2 lnc-HNRNPU-3:1