Transcript: lnc-HMGCLL1-1:3

Basic information

LNCipedia transcript ID: lnc-HMGCLL1-1:3 
LNCipedia gene ID: lnc-HMGCLL1-1
Location (hg38): chr6:54839606-54846572
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1362 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000088641.1|ENCT00000386092.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -98.5104 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HMGCLL1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HMGCLL1-1:3
5.0 lnc-HMGCLL1-1:3
5.1 lnc-GSTA5-24:2
5.2 lnc-HMGCLL1-1:3