Transcript: lnc-HMCN1-3:2

Basic information

LNCipedia transcript ID: lnc-HMCN1-3:2 
LNCipedia gene ID: lnc-HMCN1-3
Location (hg38): chr1:185710251-185743845
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 424 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT008438
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.4102 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HMCN1-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HMCN1-3:2
4.0 lnc-HMCN1-3:2
4.1 lnc-HMCN1-3:2
5.0 lnc-HMCN1-3:2
5.1 lnc-C1orf21-26:2
5.2 lnc-HMCN1-3:2