Transcript: lnc-HLCS-2:2

Basic information

LNCipedia transcript ID: lnc-HLCS-2:2 
LNCipedia gene ID: lnc-HLCS-2
RefSeq ID: NR_131189
Location (hg38): chr21:37063040-37064066
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1027 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131189.1
Alternative gene names: LOC105372795


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -53.4329 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HLCS-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CRYZL1-43:1
5.1 lnc-CRYZL1-43:1
5.2 lnc-HLCS-2:2