Transcript: lnc-HLA-F-2:1

Basic information

LNCipedia transcript ID: lnc-HLA-F-2:1 
LNCipedia gene ID: lnc-HLA-F-2
Location (hg38): chr6:29737016-29751091
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1927 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT108546
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.4712 non-coding 
CPAT coding probability 6.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HLA-F-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HLA-F-2:1
4.0 lnc-HLA-F-2:1
4.1 lnc-HLA-F-2:1
5.0 lnc-HLA-F-2:1
5.1 lnc-OR2I1P-9:1
5.2 lnc-HLA-F-2:1