Transcript: lnc-HIST1H2BN-2:1

Basic information

LNCipedia transcript ID: lnc-HIST1H2BN-2:1 
LNCipedia gene ID: lnc-HIST1H2BN-2
Location (hg38): chr6:27873705-27875052
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1348 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000083353.1|ENCT00000370482.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.5747 non-coding 
CPAT coding probability 8.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST1H2BN-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HIST1H2AL-2:1
5.0 lnc-HIST1H2AL-2:1
5.1 lnc-OR2I1P-62:1
5.2 lnc-HIST1H2BN-2:1