Transcript: lnc-HES1-2:6

Basic information

LNCipedia transcript ID: lnc-HES1-2:6 
LNCipedia gene ID: lnc-HES1-2
Location (hg38): chr3:194078428-194092159
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 694 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006356; NONHSAT094061
Alternative gene names: XLOC_002975; linc-HES1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.4301 non-coding 
CPAT coding probability 2.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HES1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HES1-1:6
3.1 lnc-HES1-2:6
4.0 lnc-HES1-2:6
4.1 lnc-HES1-2:6
5.0 lnc-HES1-2:6
5.1 lnc-MUC20-37:8
5.2 lnc-HES1-2:6