Transcript: lnc-HERC1-5:1

Basic information

LNCipedia transcript ID: lnc-HERC1-5:1 
LNCipedia gene ID: lnc-HERC1-5
Ensembl Gene ID: ENSG00000276651
Ensembl Transcript ID: ENST00000615045
Location (hg38): chr15:63500737-63503083
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2347 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT046613; ENST00000615045.1
Alternative gene names: ENSG00000276651.1; AC007950.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.5948 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HERC1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HERC1-5:1
4.0 lnc-HERC1-5:1
4.1 lnc-HERC1-5:1
5.0 lnc-HERC1-5:1
5.1 lnc-TIPIN-70:1
5.2 lnc-HERC1-5:1