Transcript: lnc-HEATR6-1:5

Basic information

LNCipedia transcript ID: lnc-HEATR6-1:5 
LNCipedia gene ID: lnc-HEATR6-1
Location (hg38): chr17:60083633-60088460
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 694 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025714; NONHSAT055073
Alternative gene names: XLOC_012538; linc-HEATR6-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.4233 non-coding 
CPAT coding probability 5.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HEATR6-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HEATR6-1:5
3.1 lnc-HEATR6-1:5
4.0 lnc-HEATR6-1:5
4.1 lnc-HEATR6-1:5
5.0 lnc-HEATR6-1:5
5.1 lnc-TUBD1-4:14
5.2 lnc-HEATR6-1:5