Transcript: lnc-HAND2-3:2

Basic information

LNCipedia transcript ID: lnc-HAND2-3:2 
LNCipedia gene ID: lnc-HAND2-3
Location (hg38): chr4:173694287-173698132
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3444 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009167; NONHSAT099299
Alternative gene names: XLOC_004167; linc-MORF4-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.3864 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HAND2-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HAND2-2:2
3.1 lnc-HAND2-3:2
4.0 lnc-HAND2-3:2
4.1 lnc-HAND2-3:2
5.0 lnc-HAND2-3:2
5.1 lnc-HPGD-16:2
5.2 lnc-HAND2-3:2

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