Transcript: lnc-HACE1-4:2

Basic information

LNCipedia transcript ID: lnc-HACE1-4:2 
LNCipedia gene ID: lnc-HACE1-4
Location (hg38): chr6:104337548-104338675
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 455 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT114190; FPKM1_group_28110_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.0122 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HACE1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HACE1-4:2
4.0 lnc-HACE1-4:2
4.1 lnc-HACE1-4:2
5.0 lnc-HACE1-4:2
5.1 lnc-SNX3-41:2
5.2 lnc-HACE1-4:2