Transcript: lnc-HAAO-1:2

Basic information

LNCipedia transcript ID: lnc-HAAO-1:2 
LNCipedia gene ID: lnc-HAAO-1
Location (hg38): chr2:42801494-42810630
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 215 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004223; NONHSAT070351
Alternative gene names: XLOC_002066; linc-HAAO-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.1511 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HAAO-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HAAO-1:2
3.1 lnc-HAAO-1:2
4.0 lnc-HAAO-1:2
4.1 lnc-HAAO-1:2
5.0 lnc-HAAO-1:2
5.1 lnc-MAP4K3-74:2
5.2 lnc-HAAO-1:2