Transcript: lnc-HAAO-1:1

Basic information

LNCipedia transcript ID: lnc-HAAO-1:1 
LNCipedia gene ID: lnc-HAAO-1
Location (hg38): chr2:42805052-42811828
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1304 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004224; NONHSAT070352
Alternative gene names: XLOC_002066; linc-HAAO-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.4233 non-coding 
CPAT coding probability 5.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HAAO-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HAAO-1:1
3.1 lnc-HAAO-1:1
4.0 lnc-HAAO-1:1
4.1 lnc-HAAO-1:1
5.0 lnc-HAAO-1:1
5.1 lnc-MAP4K3-74:1
5.2 lnc-HAAO-1:1