Transcript: lnc-H2BFWT-18:2

Basic information

LNCipedia transcript ID: lnc-H2BFWT-18:2 
LNCipedia gene ID: lnc-H2BFWT-18
RefSeq ID: NR_039980
Location (hg38): chrX:104122305-104124632
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2328 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_039980.1
Alternative gene names: LOC286437


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.3775 non-coding 
CPAT coding probability 6.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-H2BFWT-18:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-RAB40A-18:2
5.1 lnc-RAB40A-18:2
5.2 lnc-H2BFWT-18:2