Transcript: lnc-H2AFJ-2:5

Basic information

LNCipedia transcript ID: lnc-H2AFJ-2:5 
LNCipedia gene ID: lnc-H2AFJ-2
Location (hg38): chr12:14665636-14786548
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 852 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214772.2|MICT00000074440.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -195.3699 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-H2AFJ-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-H2AFJ-2:5
5.0 lnc-H2AFJ-2:5
5.1 lnc-BCL2L14-58:4
5.2 lnc-H2AFJ-2:5