Transcript: lnc-GYPC-6:2

Basic information

LNCipedia transcript ID: lnc-GYPC-6:2 
LNCipedia gene ID: lnc-GYPC-6
Location (hg38): chr2:126776811-126777725
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 484 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000044520.1|MICT00000198465.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.4678 non-coding 
CPAT coding probability 1.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GYPC-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GYPC-6:2
5.0 lnc-GYPC-6:2
5.1 lnc-MYO7B-11:2
5.2 lnc-GYPC-6:2