Transcript: lnc-GYPA-1:1

Basic information

LNCipedia transcript ID: lnc-GYPA-1:1 
LNCipedia gene ID: lnc-GYPA-1
Location (hg38): chr4:144201470-144213094
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 776 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008603; NONHSAT098594
Alternative gene names: XLOC_004108; linc-GYPA-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.9939 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GYPA-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GYPA-1:1
3.1 lnc-GYPA-1:1
4.0 lnc-GYPA-1:1
4.1 lnc-GYPA-1:1
5.0 lnc-GYPA-1:1
5.1 lnc-SLC10A7-27:2
5.2 lnc-GYPA-1:1