Transcript: lnc-GUSB-3:1

Basic information

LNCipedia transcript ID: lnc-GUSB-3:1 
LNCipedia gene ID: lnc-GUSB-3
Location (hg38): chr7:66119603-66128724
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 377 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000435524.1; RP5-1132H15.1-001; OTTHUMT00000345082.1; NONHSAT121142
Alternative gene names: ENSG00000234185.1; RP5-1132H15.1; OTTHUMG00000156655.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.9983 non-coding 
CPAT coding probability 8.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GUSB-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GUSB-3:1
4.0 lnc-GUSB-3:1
4.1 lnc-GUSB-3:1
5.0 lnc-GUSB-3:1
5.1 lnc-TRIM74-92:2
5.2 lnc-GUSB-3:1