Transcript: lnc-GTSF1L-9:2

Basic information

LNCipedia transcript ID: lnc-GTSF1L-9:2 
LNCipedia gene ID: lnc-GTSF1L-9
Location (hg38): chr20:43589985-43590570
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 586 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000054888.1|FTMT27800001658.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -211.6834 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTSF1L-9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GTSF1L-9:2
5.0 lnc-GTSF1L-9:2
5.1 lnc-MATN4-47:2
5.2 lnc-GTSF1L-9:2