Transcript: lnc-GTF2B-15:5

Basic information

LNCipedia transcript ID: lnc-GTF2B-15:5 
LNCipedia gene ID: lnc-GTF2B-15
Location (hg38): chr1:88539053-88570860
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2012 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT004326
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -309.2004 non-coding 
CPAT coding probability 2.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTF2B-15:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTF2B-1:5
4.0 PKN2-AS1:4
4.1 PKN2-AS1:4
5.0 PKN2-AS1:4
5.1 lnc-RBMXL1-15:5
5.2 lnc-GTF2B-15:5