Transcript: lnc-GTDC1-27:7

Basic information

LNCipedia transcript ID: lnc-GTDC1-27:7 
LNCipedia gene ID: lnc-GTDC1-27
Location (hg38): chr2:143671757-143672004
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 248 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: uc_71_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -447.4333 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTDC1-27:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTDC1-15:1
4.0 lnc-GTDC1-15:1
4.1 lnc-GTDC1-2:9
5.0 lnc-GTDC1-2:9
5.1 lnc-MMADHC-91:7
5.2 lnc-GTDC1-27:7