Transcript: lnc-GSDMC-35:1

Basic information

LNCipedia transcript ID: lnc-GSDMC-35:1 
LNCipedia gene ID: lnc-GSDMC-35
Ensembl Gene ID: ENSG00000285108
Ensembl Transcript ID: ENST00000646849
Location (hg38): chr8:129685401-129723023
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 10728 bp
Exons: 8
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646849.1
Alternative gene names: ENSG00000285108.1; AC103718.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.2079 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GSDMC-35:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FAM84B-35:1
5.1 lnc-FAM84B-35:1
5.2 lnc-GSDMC-35:1