Transcript: lnc-GRM4-1:2

Basic information

LNCipedia transcript ID: lnc-GRM4-1:2 
LNCipedia gene ID: lnc-GRM4-1
Location (hg38): chr6:33997490-34004885
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3150 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003ogj_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.4027 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRM4-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GRM4-1:2
4.0 lnc-GRM4-1:2
4.1 lnc-GRM4-1:2
5.0 lnc-GRM4-1:2
5.1 lnc-LEMD2-8:2
5.2 lnc-GRM4-1:2