Transcript: lnc-GPR6-1:1

Basic information

LNCipedia transcript ID: lnc-GPR6-1:1 
LNCipedia gene ID: lnc-GPR6-1
Location (hg38): chr6:110224296-110231632
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 315 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000445340.1; RP11-315C6.3-001; OTTHUMT00000041775.1; NONHSAT114417
Alternative gene names: ENSG00000244179.1; RP11-315C6.3; OTTHUMG00000015355.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.2626 non-coding 
CPAT coding probability 1.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR6-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR6-1:1
4.0 lnc-GPR6-1:1
4.1 lnc-GPR6-1:1
5.0 lnc-GPR6-1:1
5.1 lnc-SMPD2-22:1
5.2 lnc-GPR6-1:1