Transcript: lnc-GPR27-12:1

Basic information

LNCipedia transcript ID: lnc-GPR27-12:1 
LNCipedia gene ID: lnc-GPR27-12
Ensembl Gene ID: ENSG00000274387
Ensembl Transcript ID: ENST00000615819
Location (hg38): chr3:71567863-71571112
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 604 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT090406; ENST00000615819.1
Alternative gene names: ENSG00000274387.1; RP11-154H23.5; AC097634.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.8643 non-coding 
CPAT coding probability 10.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR27-12:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR27-12:1
4.0 lnc-GPR27-12:1
4.1 lnc-GPR27-12:1
5.0 lnc-GPR27-12:1
5.1 lnc-FAM19A1-17:1
5.2 lnc-GPR27-12:1