Transcript: lnc-GPR157-7:3

Basic information

LNCipedia transcript ID: lnc-GPR157-7:3 
LNCipedia gene ID: lnc-GPR157-7
RefSeq ID: NR_104622
Location (hg38): chr1:9425094-9428996
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2363 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104622; NR_104622.2
Alternative gene names: LOC100506022


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.7758 non-coding 
CPAT coding probability 14.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR157-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf200-4:3
4.0 lnc-C1orf200-4:3
4.1 lnc-C1orf200-4:3
5.0 lnc-C1orf200-4:3
5.1 lnc-CLSTN1-5:3
5.2 lnc-GPR157-7:3