Transcript: lnc-GPD2-2:5

Basic information

LNCipedia transcript ID: lnc-GPD2-2:5 
LNCipedia gene ID: lnc-GPD2-2
Location (hg38): chr2:156803339-157062836
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 13833 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000045225.1|MICT00000201473.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.4712 non-coding 
CPAT coding probability 8.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPD2-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPD2-2:5
5.0 lnc-GPD2-2:5
5.1 lnc-UPP2-11:5
5.2 lnc-GPD2-2:5