Transcript: lnc-GJA10-17:1

Basic information

LNCipedia transcript ID: lnc-GJA10-17:1 
LNCipedia gene ID: lnc-GJA10-17
Location (hg38): chr6:90401940-90419353
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1431 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003pnx_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.6113 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GJA10-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GJA10-17:1
4.0 lnc-GJA10-17:1
4.1 lnc-GJA10-17:1
5.0 lnc-GJA10-17:1
5.1 lnc-PM20D2-22:1
5.2 lnc-GJA10-17:1