Transcript: lnc-GGCT-1:84

Basic information

LNCipedia transcript ID: lnc-GGCT-1:84 
LNCipedia gene ID: lnc-GGCT-1
Location (hg38): chr7:30572136-30579429
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1868 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000196295.7|FTMT22500010981.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.2854 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GGCT-1:84 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GGCT-1:84
5.0 lnc-GGCT-1:84
5.1 lnc-PDE1C-13:39
5.2 lnc-GGCT-1:84