Transcript: lnc-GEMIN6-1:4

Basic information

LNCipedia transcript ID: lnc-GEMIN6-1:4 
LNCipedia gene ID: lnc-GEMIN6-1
Location (hg38): chr2:38811559-38813574
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2016 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_engstrom06_BX108565_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.7668 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GEMIN6-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GEMIN6-1:4
4.0 lnc-GEMIN6-1:4
4.1 lnc-GEMIN6-1:4
5.0 lnc-GEMIN6-1:4
5.1 lnc-RASGRP3-48:4
5.2 lnc-GEMIN6-1:4