Transcript: lnc-GDF6-2:1

Basic information

LNCipedia transcript ID: lnc-GDF6-2:1 
LNCipedia gene ID: lnc-GDF6-2
Ensembl Gene ID: ENSG00000270131
Ensembl Transcript ID: ENST00000602571
Location (hg38): chr8:96140572-96140944
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 373 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT127853; ENST00000602571.1
Alternative gene names: ENSG00000270131.1; KB-1043D8.8; AP003465.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -237.336 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GDF6-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GDF6-2:1
4.0 lnc-GDF6-2:1
4.1 lnc-GDF6-2:1
5.0 lnc-GDF6-2:1
5.1 lnc-ZNF706-130:1
5.2 lnc-GDF6-2:1