Transcript: lnc-GCLC-1:13

Basic information

LNCipedia transcript ID: lnc-GCLC-1:13 
LNCipedia gene ID: lnc-GCLC-1
Location (hg38): chr6:53562568-53565051
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2155 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012189; NONHSAT113184
Alternative gene names: XLOC_005747; linc-GCLC


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.596 non-coding 
CPAT coding probability 1.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GCLC-1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLHL31-1:7
3.1 lnc-KLHL31-1:10
4.0 lnc-GCLC-1:13
4.1 lnc-GCLC-1:13
5.0 lnc-GCLC-1:13
5.1 lnc-GSTA5-13:12
5.2 lnc-GCLC-1:13