Transcript: lnc-GBX1-1:1

Basic information

LNCipedia transcript ID: lnc-GBX1-1:1 
LNCipedia gene ID: lnc-GBX1-1
Location (hg38): chr7:151149777-151174745
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 556 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT124198
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -267.6174 non-coding 
CPAT coding probability 5.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GBX1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GBX1-1:1
4.0 lnc-GBX1-1:1
4.1 lnc-GBX1-1:1
5.0 lnc-GBX1-1:1
5.1 lnc-KMT2C-27:1
5.2 lnc-GBX1-1:1