Transcript: lnc-GAS8-1:10

Basic information

LNCipedia transcript ID: lnc-GAS8-1:10 
HGNC Gene Symbol: lnc-GAS8-1    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2193
Ensembl Gene ID: ENSG00000260923
Ensembl Transcript ID: ENST00000621799
Location (hg38): chr16:90173217-90186204
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 723 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000621799.1
Alternative gene names: ENSG00000260528.3; FAM157C; ENSG00000260923.6; LINC02193


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.7681 non-coding 
CPAT coding probability 17.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GAS8-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GAS8-1:10
4.1 lnc-GAS8-1:10
5.0 lnc-GAS8-1:10
5.1 lnc-SPG7-44:3
5.2 lnc-GAS8-1:10