Transcript: lnc-GAS1-3:2

Basic information

LNCipedia transcript ID: lnc-GAS1-3:2 
LNCipedia gene ID: lnc-GAS1-3
Location (hg38): chr9:87084161-87085151
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 991 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT132852
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.4796 non-coding 
CPAT coding probability 83.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GAS1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GAS1-3:2
4.0 lnc-GAS1-3:2
4.1 lnc-GAS1-3:2
5.0 lnc-GAS1-3:2
5.1 lnc-SEMA4D-58:2
5.2 lnc-GAS1-3:2