Transcript: lnc-GAS1-2:2

Basic information

LNCipedia transcript ID: lnc-GAS1-2:2 
LNCipedia gene ID: lnc-GAS1-2
RefSeq ID: NR_027471
Location (hg38): chr9:87008451-87042126
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2016 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT132848; NR_027471; NR_027471.1
Alternative gene names: LOC440173


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.6574 non-coding 
CPAT coding probability 9.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GAS1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GAS1-2:2
4.0 lnc-GAS1-2:2
4.1 lnc-GAS1-2:2
5.0 lnc-GAS1-2:2
5.1 lnc-SEMA4D-59:1
5.2 lnc-GAS1-2:2