Transcript: lnc-GALNTL5-2:11

Basic information

LNCipedia transcript ID: lnc-GALNTL5-2:11 
LNCipedia gene ID: lnc-GALNTL5-2
Location (hg38): chr7:151806351-151810820
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2522 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242048.2|ENST00000462083.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -59.2774 non-coding 
CPAT coding probability 25.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GALNTL5-2:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GALNTL5-2:11
5.0 lnc-GALNTL5-2:11
5.1 lnc-GIMAP2-35:4
5.2 lnc-GALNTL5-2:11