Transcript: lnc-FZD4-1:5

Basic information

LNCipedia transcript ID: lnc-FZD4-1:5 
LNCipedia gene ID: lnc-FZD4-1
Location (hg38): chr11:86889586-86938475
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1339 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255471.1|FTMT24100034713.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -125.901 non-coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FZD4-1:5 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FZD4-1:5
5.0 lnc-FZD4-1:5
5.1 lnc-CREBZF-24:2
5.2 lnc-FZD4-1:5