Transcript: lnc-FST-6:3

Basic information

LNCipedia transcript ID: lnc-FST-6:3 
LNCipedia gene ID: lnc-FST-6
Location (hg38): chr5:53338037-53371693
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2211 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000075836.1|ENCT00000344283.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.6323 non-coding 
CPAT coding probability 5.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FST-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FST-6:3
5.0 lnc-FST-6:3
5.1 lnc-GPBP1-47:1
5.2 lnc-FST-6:3