Transcript: lnc-FSIP1-4:20

Basic information

LNCipedia transcript ID: lnc-FSIP1-4:20 
LNCipedia gene ID: lnc-FSIP1-4
Location (hg38): chr15:39241081-39273906
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 519 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259345.1|FTMT25700008368.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -73.9855 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSIP1-4:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FSIP1-4:20
5.0 lnc-FSIP1-4:20
5.1 lnc-VPS39-60:17
5.2 lnc-FSIP1-4:20