Transcript: lnc-FSHR-9:1

Basic information

LNCipedia transcript ID: lnc-FSHR-9:1 
LNCipedia gene ID: lnc-FSHR-9
Location (hg38): chr2:51202081-51221764
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 499 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000416262; ENST00000416262.1; AC007680.2-001; OTTHUMT00000324131.4; NONHSAT070653
Alternative gene names: ENSG00000237374; AC007680.2; ENSG00000237374.1; OTTHUMG00000151842.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.1587 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSHR-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NRXN1-1:1
3.1 lnc-NRXN1-1:1
4.0 lnc-NRXN1-1:1
4.1 lnc-NRXN1-1:1
5.0 lnc-NRXN1-1:1
5.1 lnc-CALM2-32:1
5.2 lnc-FSHR-9:1