Transcript: lnc-FOXQ1-6:3

Basic information

LNCipedia transcript ID: lnc-FOXQ1-6:3 
LNCipedia gene ID: lnc-FOXQ1-6
Location (hg38): chr6:1267325-1270252
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 692 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT106425
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -105.8219 non-coding 
CPAT coding probability 3.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXQ1-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXQ1-6:3
4.0 lnc-FOXQ1-6:3
4.1 lnc-FOXQ1-6:3
5.0 lnc-FOXQ1-6:3
5.1 lnc-RIPK1-110:3
5.2 lnc-FOXQ1-6:3