Transcript: lnc-FOXQ1-17:4

Basic information

LNCipedia transcript ID: lnc-FOXQ1-17:4 
LNCipedia gene ID: lnc-FOXQ1-17
Location (hg38): chr6:1149801-1153262
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1827 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT106384
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.2744 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXQ1-17:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL033381.1-4:4
4.0 lnc-AL033381.1-4:4
4.1 lnc-AL033381.1-4:4
5.0 lnc-AL033381.1-4:4
5.1 lnc-RIPK1-120:4
5.2 lnc-FOXQ1-17:4