Transcript: lnc-FOXO6-2:5

Basic information

LNCipedia transcript ID: lnc-FOXO6-2:5 
LNCipedia gene ID: lnc-FOXO6-2
Location (hg38): chr1:41242340-41264558
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 660 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT002686
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.0045 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXO6-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXO6-2:5
4.0 lnc-FOXO6-2:5
4.1 lnc-FOXO6-2:5
5.0 lnc-FOXO6-2:5
5.1 lnc-KCNQ4-12:7
5.2 lnc-FOXO6-2:5