Transcript: lnc-FOXD1-3:12

Basic information

LNCipedia transcript ID: lnc-FOXD1-3:12 
LNCipedia gene ID: lnc-FOXD1-3
Location (hg38): chr5:73199109-73201911
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 245 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT102105
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -182.6435 non-coding 
CPAT coding probability 26.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD1-3:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRA2-13:2
4.0 lnc-ANKRA2-13:2
4.1 lnc-ANKRA2-3:11
5.0 lnc-ANKRA2-3:11
5.1 lnc-ANKRD34B-140:12
5.2 lnc-FOXD1-3:12