Transcript: lnc-FOXD1-3:10

Basic information

LNCipedia transcript ID: lnc-FOXD1-3:10 
LNCipedia gene ID: lnc-FOXD1-3
Location (hg38): chr5:73197150-73201985
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 497 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT102104
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -182.6435 non-coding 
CPAT coding probability 7.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD1-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRA2-13:1
4.0 lnc-ANKRA2-13:1
4.1 lnc-ANKRA2-3:10
5.0 lnc-ANKRA2-3:10
5.1 lnc-ANKRD34B-140:10
5.2 lnc-FOXD1-3:10