Transcript: lnc-FKBP9-1:1

Basic information

LNCipedia transcript ID: lnc-FKBP9-1:1 
LNCipedia gene ID: lnc-FKBP9-1
Location (hg38): chr7:33016059-33016892
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 538 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000434504.1; AC083863.7-001; OTTHUMT00000328912.1; NONHSAT120010
Alternative gene names: ENSG00000237059.1; AC083863.7; OTTHUMG00000152986.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.0351 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FKBP9-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FKBP9-1:1
4.0 lnc-FKBP9-1:1
4.1 lnc-FKBP9-1:1
5.0 lnc-FKBP9-1:1
5.1 lnc-CCDC129-18:1
5.2 lnc-FKBP9-1:1