Transcript: lnc-FGL2-2:1

Basic information

LNCipedia transcript ID: lnc-FGL2-2:1 
LNCipedia gene ID: lnc-FGL2-2
Ensembl Gene ID: ENSG00000225703
Ensembl Transcript ID: ENST00000434531
Location (hg38): chr7:76972679-76976961
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 453 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000434531; ENST00000434531.1; AC005522.7-001; OTTHUMT00000341720.1
Alternative gene names: ENSG00000225703; AC005522.7; ENSG00000225703.1; OTTHUMG00000155798.1; AC114737.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -148.5885 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGL2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FGL2-1:1
3.1 lnc-FGL2-2:1
4.0 lnc-FGL2-2:1
4.1 lnc-FGL2-2:1
5.0 lnc-FGL2-2:1
5.1 lnc-SEMA3C-29:1
5.2 lnc-FGL2-2:1